Update - the engine is not knocking nearly as bad as the first one when I compare it to the movie I recorded from the first engine. The knocking sound is there, but not nearly as audible, and it's not getting worse. I can only hear it if I'm in the garage or next to a parked car in a parking space. If sitting at a red light with no one around me, it's not audible. The old engine was audible 100 feet away. In fact, the sound of the injectors firing is almost as loud, ticka-ticka-ticka-ticka, so this knock is quiet compared to the first engine. From what I read, a mild knocking sound at idle is normal because of the mechanics of the cam phaser retarding the cam at idle. We'll see if it gets worse. The TSB says a quiet knock does not effect performance or durability. It's possible that I'm not going to get any service on attempt #2, but we'll see.
Also, in the first engine, it was clear that pulling the power to injector #4 cleared the problem, so I'm thinking that either timing for fuel injection to that cylinder was wrong or it was preignition. Either way, I could have been looking at a hole in the piston or crank/rod problems. I really don't think the first issue was a cam phaser because of this.
On a different subject, regarding drivability, one thing that is starting to bug me is that this truck wants to pull out in 2nd gear from a stop. It didn't do this right after I got the new engine, and am thinking that it's doing this because the PCM/ECM is "learning" that I want to conserve fuel. You give it gas, it starts to pull out in 2nd and then realizes you want to go faster and downshifts. It feels like a one second hesitation, but after feeling this multiple times, I can assume that it's the tranny doing a "2nd gear for fuel savings." Also, if you floor it, it pulls out in 1st, without any problem. If I just keep my foot on the floor to let the engine shift at redline, it never gets to redline and seems like it has trouble deciding when to shift. Almost like a rev limiter is coming on before redline, hesitating and then dropping into the next gear. I'm going to run it a little harder this weekend to see if maybe this loosens things up a little or gives the computer a chance to relearn different driving habits. It's gonna cost me at the pump but it's worth the try. More status next Monday. If this is the computer, I'd love to have this reprogrammed because it's annoying enough to make me hate pulling out slowly.
:unsure: